BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016B02SP1|AL426951
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1255 1717 0.0
3x_Contig1806 435 e-122
>3x_Contig1255
Length = 5009
Score = 1717 bits (865), Expect = 0.0
Identities = 891/897 (99%), Gaps = 3/897 (0%)
Strand = Plus / Minus
Query: 1 aagctggaagtaagttcgccaagaatttacgcagcaagtgtttcaagggtttagagtgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2172 aagctggaagtaagttcgccaagaatttacgcagcaagtgtttcaagggtttagagtgag 2113
Query: 61 ttagtattcaaacaatgtataattatatgtggacaaagtagtagagtttagcctaattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2112 ttagtattcaaacaatgtataattatatgtggacaaagtagtagagtttagcctaattta 2053
Query: 121 tgggggccttggccttatacttgatatttactcccataaatggagggctagaaatgccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2052 tgggggccttggccttatacttgatatttactcccataaatggagggctagaaatgccca 1993
Query: 181 tacaatttttgggaaccacagaagtctattctgttttgtcccaatcctggcttttagata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1992 tacaatttttgggaaccacagaagtctattctgttttgtcccaatcctggcttttagata 1933
Query: 241 agatagcgtcaagaacgtcttgaccgacgttttcctcgtattcctcgtctgtcaagtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1932 agatagcgtcaagaacgtcttgaccgacgttttcctcgtattcctcgtctgtcaagtttg 1873
Query: 301 attttggacctttatagaacttatgcttgtaaatgaaataataaattgttgccaagaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872 attttggacctttatagaacttatgcttgtaaatgaaataataaattgttgccaagaacc 1813
Query: 361 atactgcaccaatgaaaacaacactgtagttcatagtgtctggagttataccatgctgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1812 atactgcaccaatgaaaacaacactgtagttcatagtgtctggagttataccatgctgtt 1753
Query: 421 cagttggaaagaagactagtagtatcatgaaaagttcaaagatgatggaaatccaattta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1752 cagttggaaagaagactagtagtatcatgaaaagttcaaagatgatggaaatccaattta 1693
Query: 481 caactggagagaggtacttccccatgaaaaatgcacccggggtaaacacatctttaccgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1692 caactggagagaggtacttccccatgaaaaatgcacccggggtaaacacatctttaccgt 1633
Query: 541 aagtcattcttagcaagtttggaagcatccatgagaagtagttagcagagatgtacaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1632 aagtcattcttagcaagtttggaagcatccatgagaagtagttagcagagatgtacaatg 1573
Query: 601 agaataaagctgaagaagcaactgggccaatcaaacatagacatccaatagccagggcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1572 agaataaagctgaagaagcaactgggccaatcaaacatagacatccaatagccagggcga 1513
Query: 661 cgcctgcgcctacccaagttgctcttaatggggacgacaacttaacattaacaaccttta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1512 cgcctgcgcctacccaagttgctcttaatggggacgacaacttaacattaacaaccttta 1453
Query: 721 tccacgacgaaaatggtaacccatcatcgcgagcgaaagcccaaatttgtctggagattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1452 tccacgacgaaaatggtaacccatcatcgcgagcgaaagcccaaatttgtctggagattg 1393
Query: 781 cagtcaagcttgaagctgccatcaaaaactgacagaatgcgataagggkcatgatagc-a 839
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 1392 cagtcaagcttgaagctgccatcaaaaactgacagaatgcgataagggtcatgatagcaa 1333
Query: 840 tagtccactttttaccc-aggc-tcgaataagacttgcgctaatggttggtgaawtt 894
||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| ||
Sbjct: 1332 tagtccactttttacccaaggcatcgaataagacttgcgctagtggttggtgaaatt 1276
>3x_Contig1806
Length = 53694
Score = 435 bits (219), Expect = e-122
Identities = 507/603 (84%)
Strand = Plus / Plus
Query: 237 gataagatagcgtcaagaacgtcttgaccgacgttttcctcgtattcctcgtctgtcaag 296
|||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 42341 gataagatagcgtcaagaacgtcttgaccgaccttctcctcatattcttcgtctgtcaag 42400
Query: 297 tttgattttggacctttatagaacttatgcttgtaaatgaaataataaattgttgccaag 356
|||||||||||||| |||||||||| | |||||||| || ||| ||||| || | ||||
Sbjct: 42401 tttgattttggaccactatagaacttgtacttgtaaacgagatagtaaatcgtaggcaag 42460
Query: 357 aaccatactgcaccaatgaaaacaacactgtagttcatagtgtctggagttataccatgc 416
| ||||||||| ||||||||||| |||||||||||||| |||||||| || || || |||
Sbjct: 42461 acccatactgcgccaatgaaaactacactgtagttcatcgtgtctggggtgatgccgtgc 42520
Query: 417 tgttcagttggaaagaagactagtagtatcatgaaaagttcaaagatgatggaaatccaa 476
|| || | ||| ||||| |||| || ||||||||||| |||||| | ||| |||||||||
Sbjct: 42521 tgatccgctgggaagaaaactaataatatcatgaaaatttcaaatacgatagaaatccaa 42580
Query: 477 tttacaactggagagaggtacttccccatgaaaaatgcacccggggtaaacacatcttta 536
||||| |||||||| || ||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 42581 tttaccactggagaaagatacttccccatgaaaaaagcacccggggtgaatacatctttc 42640
Query: 537 ccgtaagtcattcttagcaagtttggaagcatccatgagaagtagttagcagagatgtac 596
|| ||||||||||| | ||||||||||| |||||| || |||||||| ||||| | |
Sbjct: 42641 ccataagtcattctcaacaagtttggaaccatccaggaaaagtagttcgcagaaacagcc 42700
Query: 597 aatgagaataaagctgaagaagcaactgggccaatcaaacatagacatccaatagccagg 656
|| |||||||| |||||||| || |||||||||||||| || | ||| ||||| ||||
Sbjct: 42701 aaggagaataatgctgaagatgctactgggccaatcaagcacaaacaaccaatggccaaa 42760
Query: 657 gcgacgcctgcgcctacccaagttgctcttaatggggacgacaacttaacattaacaacc 716
||| | || ||||| ||||| |||||||| ||||| ||||| | ||| | ||| || ||
Sbjct: 42761 gcggcaccagcgccgacccaggttgctctcaatggagacgatagcttgatattgacgact 42820
Query: 717 tttatccacgacgaaaatggtaacccatcatcgcgagcgaaagcccaaatttgtctggag 776
|| ||||| || || || ||||| |||||||| || || |||||||||||||||||||||
Sbjct: 42821 ttgatccaggaagagaacggtaatccatcatcacgggcaaaagcccaaatttgtctggag 42880
Query: 777 attgcagtcaagcttgaagctgccatcaaaaactgacagaatgcgataagggkcatgata 836
|| ||||| ||| | ||||||||||||||||| || ||||| || |||||| |||||||
Sbjct: 42881 atagcagttaagatagaagctgccatcaaaaattggcagaaggcaataaggaccatgata 42940
Query: 837 gca 839
|||
Sbjct: 42941 gca 42943
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5934
Number of Sequences: 1807
Number of extensions: 5934
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 2
length of query: 895
length of database: 10,358,551
effective HSP length: 16
effective length of query: 879
effective length of database: 10,329,639
effective search space: 9079752681
effective search space used: 9079752681
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)